Selected Publications

Liu Yang, Gu Shi. GIRNet: Co-Learning Semantic-aware Unsupervised Segmentation for Pathological Image Registration. MICCAI, 2023.
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Sun, Huili, Jiang, Rongtao, Dai, Wei, Dufford, Alexander J, Noble, Stephanie, Spann, Marisa N, Gu Shi, Scheinost, Dustin. Network controllability of structural connectomes in the neonatal brain. Nat. Commun, 2023.
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Li Qian, Yao Li, You Wanfang, Liu Jiang, Deng Shikuang, Li Bin, Luo Lekai, Zhao Youjin, Wang Yuxia, Wang Yaxuan, others. Controllability of Functional Brain Networks and Its Clinical Significance in First-Episode Schizophrenia. Schizophr Bull, 2022.
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He Shwai, Gu Shi. Multi-modal Attention Network for Stock Movements Prediction. arXiv, 2022.
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Li Yuhang, Deng Shikuang, Dong Xin, Gu Shi. Converting artificial neural networks to spiking neural networks via parameter calibration. arXiv, 2022.
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Gu Shi, Fotiadis Panagiotis, Parkes Linden, Xia Cedric H, Gur Ruben C, Gur Raquel E, Roalf David R, Satterthwaite Theodore D, Bassett Dani S. Network controllability mediates the relationship between rigid structure and flexible dynamics. Nat. Neurosci, 2022.
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Deng Shikuang, Li Yuhang, Zhang Shanghang, Gu Shi. Temporal efficient training of spiking neural network via gradient re-weighting. ICLR, 2022.
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Deng Shikuang, Li Jingwei, Thomas Yeo BT, Gu Shi. Control theory illustrates the energy efficiency in the dynamic reconfiguration of functional connectivity. Commun. Biol, 2022.
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BiqiuTang, WenjingZhang, ShikuangDeng, JiangLiu, NaHu, QiyongGong, ShiGu, SuLui. Age-associated network controllability changes in first episode drug-naive schizophrenia. BMC Psychiatry, 2022.
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Hu Na, Zhang Tianwei, Wu Yifan, Tang Biqiu, Li Minlong, Song Bin, Gong Qiyong, Wu Min, Gu Shi, Lui Su. Detecting brain lesions in suspected acute ischemic stroke with CT-based synthetic MRI using generative adversarial networks. ATM, 2021.
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Li Yuhang, Guo Yufei, Zhang Shanghang, Deng Shikuang, Hai Yongqing, Gu Shi. Differentiable spike:Rethinking gradient-descent for training spiking neural networks. NeurIPS, 2021.
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Cui Hengji, Wei Dong, Ma Kai, Gu Shi, Zheng Yefeng. A unified framework for generalized low-shot medical image segmentation with scarce data. IEEE Trans Med Imaging, 2021.
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Yang Huzheng, Zhang Shanghang, Wu Yifan, Li Yuanning, Gu Shi. Effective Ensemble of Deep Neural Networks Predicts Neural Responses to Naturalistic Videos. bioRxiv, 2021.
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Li Yuhang, Deng Shikuang, Dong Xin, Gong Ruihao, Gu Shi. A free lunch from ANN:Towards efficient, accurate spiking neural networks calibration. ICML, 2021.
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Li Yuhang, Gong Ruihao, Tan Xu, Yang Yang, Hu Peng, Zhang Qi, Yu Fengwei, Wang Wei, Gu Shi. Brecq:Pushing the limit of post-training quantization by block reconstruction. arXiv, 2021.
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Shikuang Deng, Shi Gu. Optimal Conversion of Conventional Artificial Neural Networks to Spiking Neural Networks. ICLR, 2021.
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Ashourvan Arian, Shah Preya, Pines Adam, Gu Shi, Lynn Christopher W, Bassett Danielle S, Davis Kathryn A, Litt Brian. Pairwise maximum entropy model explains the role of white matter structure in shaping emergent co-activation states. Commun. Biol, 2021.
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Li Yuhang, Zhu Feng, Gong Ruihao, Shen Mingzhu, Dong Xin, Yu Fengwei, Lu Shaoqing, Gu Shi. Mixmix:All you need for data-free compression are feature and data mixing. ICCV, 2021.
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Yang Zhen, Telesford Qawi K, Franco Alexandre R, Lim Ryan, Gu Shi, Xu Ting, Ai Lei, Castellanos Francisco X, Yan Chao-Gan, Colcombe Stan, Michael P. Milham. Measurement reliability for individual differences in multilayer network dynamics:Cautions and considerations. NeuroImage, 2021.
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Zhang Tianwei, Yu Lequan, Hu Na, Lv Su, Gu Shi. Robust medical image segmentation from non-expert annotations with tri-network. MICCAI, 2020.
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Cui Zaixu, Stiso Jennifer, Baum Graham L, Kim Jason Z, Roalf David R, Betzel Richard F, Gu Shi, Lu Zhixin, Xia Cedric H, He Xiaosong, others. Optimization of energy state transition trajectory supports the development of executive function during youth. eLife, 2020.
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Deng Shikuang, Gu Shi. Controllability analysis of functional brain networks. arXiv, 2020.
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Gu Shi, Xia Cedric Huchuan, Ciric Rastko, Moore Tyler M, Gur Ruben C, Gur Raquel E, Satterthwaite Theodore D, Bassett Danielle S. Unifying the notions of modularity and core-periphery structure in functional brain networks during youth. Cereb. Cortex, 2020.
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Xia Cedric Huchuan, Ma Zongming, Ciric Rastko, Gu Shi, Betzel Richard F, Kaczkurkin, Antonia N, Calkins, Monica E, Cook Philip A, Garcia de la Garza Angel, Vandekar Simon N, others. Linked dimensions of psychopathology and connectivity in functional brain networks. Nat. Commun, 2018.
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Wu-Yan Elena, Betzel Richard F, Tang Evelyn, Gu Shi, Pasqualetti Fabio, Bassett Danielle S. Benchmarking measures of network controllability on canonical graph models. J Nonlinear Sci, 2018.
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Norton Heidi K, Emerson Daniel J, Huang Harvey, Kim Jesi, Titus Katelyn R, Gu Shi, Bassett Danielle S, Phillips-Cremins Jennifer E. Detecting hierarchical genome folding with network modularity. Nat. Methods, 2018.
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Tang Evelyn, Giusti Chad, Baum Graham L, Gu Shi, Pollock Eli, Kahn Ari E, Roalf David R, Moore Tyler M, Ruparel Kosha, Gur Ruben C, others. Developmental increases in white matter network controllability support a growing diversity of brain dynamics. Nat. Commun, 2017.
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Gu Shi, Betzel Richard F, Mattar Marcelo G, Cieslak Matthew, Delio Philip R, Grafton Scott T, Pasqualetti Fabio, Bassett Danielle S. Optimal trajectories of brain state transitions. Neuroimage, 2017.
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Muldoon Sarah Feldt, Pasqualetti Fabio, Gu Shi, Cieslak Matthew, Grafton Scott T, Vettel Jean M, Bassett Danielle S. Stimulation-based control of dynamic brain networks. PLoS Comput. Biol, 2016.
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Betzel Richard F, Gu Shi, Medaglia John D, Pasqualetti Fabio, Bassett Danielle S. Optimally controlling the human connectome:the role of network topology. Sci. Rep, 2016.
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Gu Shi, Pasqualetti Fabio, Cieslak Matthew, Telesford Qawi K, Yu Alfred B, Kahn Ari E, Medaglia John D, Vettel Jean M, Miller Michael B, Grafton Scott T, others. Controllability of structural brain networks. Nat. Commun, 2015.
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Gu Shi, Satterthwaite Theodore D, Medaglia John D, Yang Muzhi, Gur Raquel E, Gur Ruben C, Bassett Danielle S. Emergence of system roles in normative neurodevelopment. PNAS, 2015.
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